| Date/Time | Event |
|---|---|
|
2022-01-17 - 2022-01-19 10:00 CET - 17:00 CET |
[ALMF] Essentials I - Essentials of Widefield-Microscopy (online) |
|
2022-01-18 - 2022-01-19 10:00 CET - 17:00 CET |
[ALMF] Essentials I - Essentials of Widefield-Microscopy (online) |
|
2022-01-24 - 2022-01-26 10:00 CET - 17:00 CET |
[ALMF]: Essentials II - Essentials of confocal microscopy (online) |
|
2022-01-25 - 2022-01-26 10:00 CET - 17:00 CET |
[ALMF]: Essentials II - Essentials of confocal microscopy (online) |
|
2022-02-14 - 2022-02-16 13:00 CET - 17:30 CET |
Overview of Scientific Workflow Systems, Workshop
Online, Connection details will be shared via e-mail at a later point |
|
2022-03-02 14:00 CET - 15:00 CET |
Bio-IT Taskforce Meeting
Online, Connection details will be shared via e-mail at a later point |
|
2022-05-04 14:00 CEST - 15:00 CEST |
Bio-IT Taskforce Meeting
Online, Connection details will be shared via e-mail at a later point |
|
2022-07-06 14:00 CEST - 15:00 CEST |
Bio-IT Taskforce Meeting
Online, Connection details will be shared via e-mail at a later point |
|
2022-09-07 14:00 CEST - 15:00 CEST |
Bio-IT Taskforce Meeting
Online, Connection details will be shared via e-mail at a later point |
|
2022-11-02 14:00 CET - 15:00 CET |
Bio-IT Taskforce Meeting
Online, Connection details will be shared via e-mail at a later point |
Planned courses 2022
The "lead" is to be intended as the reference contact within the Bio-IT project, although some course are mainly organised by collaborators.
| Tag | Meaning |
|---|---|
| :star: | Confirmed with trainers |
| :calendar: | Confirmed dates |
- 2022.01.31 - 2022.02.04 :star: :calendar: Data Carpentry
- Lead: Renato
- Team: Fotis Psomopoulos, Gaurav Diwan, Supriya Khedkar, Eleonora Mastrorilli, Luo Yan Yong (LuoYan), Hugo Tavares, Lisanna, Florian Huber, Ece Kartal
- 2022.01.28 :star: Opening seminar: Workflow management systems
- Lead: Lisanna
- Team: Jean-Karim Heriche, Charles Girardot, Anthony Fullam, Matthias Monfort, Thomas Schwarzl, Christian Arnold, Christian Schudoma, Jelle Scholtalbers, Dominik Kutra, Jurij Pecar, Sudeep Sahadevan, Josep Moscardo, Christian Tischer, Renato
- 2022.02.14 - 2022.02.16 :star: :calendar: Workflow management systems workshop
- Lead: Lisanna
- Team: see below
- 2022.02.28 - 2022.03.04 Science FAIR Open Science training course, also related Open Science training materials - targeted internally EMBL
- Lead: Lisanna
- Introduction from CyVerse
- Spreadsheets from Life Science Workshop
- Materials from predoc course
- FAIR workshop
- Old materials from data management course (5 years ago)
- 2022.02.28 - 2022.03.02 :star: :calendar: Deep Learning course - 3 afternoons
- Lead: Lisanna
- Team: Renato, Lazlo, Dominik
- 2022.03 Scientific Design course/club (with Inkscape) - 1 day - in person
- Lead: Renato
- Team: Thea Van Rossum?
- 2022.03 HPC course (requires revision of materials)
- Lead: Renato
- Team: Lisanna
- 2022.04 Python beginners - co-organised with EMBL Rome?
- Lead: Lisanna
- Team: Renato, Mattia Forneris?, Nicolas Decostes?, Francesco Tabaro?
- 2022.04 R beginners (Tidyverse)
- Lead: Renato
- Team: Lisanna
- 2022.05 Protein bioinformatics course
- Lead: Renato
- Team: Gibson group, Lisanna
- 2022.05 Ontologies - Statistics, Biases, Tools, Networks, and Interpretation
- Lead: Lisanna
- Team: Balint Meszaros
- 2022.06 CodeRefinery Intermediate/Advanced Python - training events call - training hubs or Bio-IT Python intermediate
- Lead: Renato
- Team: Lisanna, Mattia Forneris?
- 2022.06 Exploratory data analysis / Metagenomics (Introduction to Dimensionality Reduction and Clustering)
- Lead: Georg
- Team: Zeller team?
- 2022.07 Structural Biology and Dynamics course - possibly external, involve the Data Science Theory group
- Lead: Lisanna
- Team: Kashif, Jan Kosinski?
- 2022.07 Train the Trainers (Carpentry or ELIXIR)
- Lead: Lisanna
- Team: Renato
- 2022.09 Introduction to Python and Pandas (Software Carpentry based) - to be confirmed
- Lead: Renato
- Team: Lisanna, Mattia Forneris?
- 2022.09 R beginners (without Tidyverse)
- Lead: Renato
- Team: TBD
- 2022.09 Julia course - low priority, Python and R first
- Lead: Renato
- Team: Lisanna
- 2022.10 Cloud and container computing / ISB-CGC course?
- Lead: Lisanna
- Team: Georg Zeller
- 2022.10 Building websites with GitLab
- Lead: Lisanna
- Team: Renato
- 2022.11 Workflow management systems
- Lead: Lisanna
- Team: Renato
- 2022.11 Git Week
- Lead: Renato
- Team: Lisanna