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In the desired course page click the button "I'm interested", to access a form to request us to organise it again!
| Date/Time | Event |
|---|---|
|
2026-02-02 - 2026-02-03 10:00 CET - 15:00 CET |
[Bioimage Analysis Support] Essentials in image data handling and inspection
EMBL Heidelberg – ATC Meeting Room A23 – 10-A2302 |
|
2026-02-13 09:30 CET - 16:30 CET |
Visualisation of large image datasets in Fiji/MoBIE |
|
2026-03-04 14:00 CET - 15:00 CET |
Bio-IT Taskforce Meeting
Hybrid |
|
2026-03-05 09:30 CET - 12:00 CET |
Visualization of large volumetric microscopy datasets and geometric objects using Fiji/BigVolumeBrowser |
Training plan
Our wishlist of courses... please reach out if you want to help make them happen! Support is welcome in any form: as a trainer, a helper, an organiser (booking the rooms, sending emails, etc.)...
- Beginner Python
- Intermediate Python
- Intro to Julia
- Workflows (NextFlow/Snakemake/CWL (Intermediate)/Galaxy)
- Workflow Management Systems Comparison
- SLURM
- Kubernetes?
- Galaxy
- Containerization (Singularity)
- EasyBuild (modules / EESSI)
- Software development best practices for Research
- CodeRefinery + Git week materials
- Basic Git + GitLab + Git in IDEs
- Project Management with GitLab
- Websites with GitLab
- Good enough practices
- Data management/electronic notebooks (wet-lab friendly) + version control
- Data management plans
- Registries / Data repositories
- Software heritage
- Software management plans (DST software workstream)?
- AI usage - prompt engineering
- Idea generation assisting
- Summarisation
- CoPilot - software creation assistance
- Data analysis (GPT vision?)
- Format: round table / beer session to share experiences
- Command line
- SQL / regular expressions
- InkScape course