Basics of Bioimage Analysis in Python

Christian Tischer   2025-04-28   Comments Off on Basics of Bioimage Analysis in Python

Date/Time
Date(s) - 2025-04-28 - 2025-05-06
09:30 CEST - 16:00 CEST

In this 4-day course, you will be introduced to essential concepts of image analysis. You will learn how to use python for image analysis and thereby take advantage of the large and growing number of specialized python libraries. You will also learn how to automatically batch analyse many images. Learning python is also useful in general because it is currently the most popular language for scientific computing and data science. In addition, since a few years a python based image visualisation tool, namely napari, exists that allows for flexible n-dimensional image data visualisation, including overlay of segmentation and annotation layers.

The course content (to be updated) can be found here.

As a prerequisite we highly recommend the “Intermediate Python Course at EMBL from 2025-03-18 to 2025-03-19” or obtain equivalent knowledge about python basics by other means.

Course dates

  • Monday, 9:30 – 16:00, April 28, 2025 day 1
  • Tuesday, 9:30 – 16:00, April 29, 2025 day 2
  • Monday, 9:30 – 16:00, May 05, 2025 day 3
  • Tuesday,9:30 – 16:00, May 06, 2025 day 4

Bookings

Tickets

Ticket Type Spaces
Remote participation (zoom)

Registration Information