Essentials of Image Data Inspection, Handling and Presentation

Christian Tischer   2020-01-27   Comments Off on Essentials of Image Data Inspection, Handling and Presentation

Date(s) - 2020-01-27
13:30 CET - 16:30 CET


In this course, using the free software ImageJ (Fiji), we will cover the following topics:

– Image opening and saving
– Image file formats
– Image visualization: Lookup tables, brightness adjustments, …
– Image content inspection: Pixel values, bit depth, dynamic range, …
– Scientific (quantitative) presentation of image data

Please note that the focus of this course is quite different to the python image processing course, which focusses more on programming and image processing. This course will not include any programming and will not include image processing either, but will focus on scientific image inspection and presentation.

For further information, please send a mail to: Christian Tischer.


– Basic experience with the usage of computers, such as opening and saving files, installing software, a.s.o.
– Basic experience with scientific microscopy, e.g. you have used a microscope at the ALMF or EMCF.


1. Bring your own laptop
2. Install Fiji on your laptop before the course
3. Please download and unzip the course material

It is recommended that you print below document on paper such that you can write notes into it: Basic-image-inspection-and-handling


Bookings are closed for this event.